Genome Toolkit. Part 2.1: identifying, fixing, and testing a bug

In the previous article (Part 2 here), we wrote our first Genome Toolkit algorithm. Even though it was a very simple algorithm to help us search for repeating patterns, (k-mers in DNA/Genome sequences), and it seemed to work correctly, we actually had a bug in it. Let’s take a look at it, and how we can fix it.

Article version: https://rebelscience.club/2022/11/genome-toolkit-part-2-1-identifying-fixing-and-testing-a-bug/

Python unittest: https://www.youtube.com/watch?v=v_SuUfLT3lY GitLab: https://gitlab.com/RebelCoder/genome-toolkit

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